Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EL161_RS02650 | Not Available | Positive | 606153 - 607697 | 56765.7 |
| duf3087 domain-containing protein | EL161_RS02655 | Not Available | Negative | 607814 - 608335 | 19502.1 |
| substrate-binding periplasmic protein | EL161_RS02660 | Not Available | Positive | 608671 - 609447 | 28995.9 |
| cobw family gtp-binding protein | EL161_RS02665 | Not Available | Negative | 609484 - 610581 | 39825.5 |
| dead/deah box helicase | EL161_RS02670 | Not Available | Negative | 610705 - 612105 | 50529.8 |
| eal domain-containing protein | EL161_RS02675 | Not Available | Negative | 612335 - 615364 | 114806.0 |
| glycogen synthase | EL161_RS02680 | Not Available | Negative | 615521 - 617104 | 58002.2 |
| glucose-1-phosphate adenylyltransferase | EL161_RS02685 | Not Available | Negative | 617172 - 618434 | 47294.6 |
| glycogen/starch/alpha-glucan phosphorylase | EL161_RS02690 | Not Available | Negative | 618553 - 621066 | 94147.7 |
| glycogen debranching protein glgx | EL161_RS02695 | Not Available | Negative | 621069 - 623327 | 84098.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

