Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | EL161_RS02505 | Not Available | Negative | 566990 - 568339 | 51825.1 |
| hypothetical protein | EL161_RS02510 | Not Available | Positive | 568924 - 569274 | 12553.4 |
| group ii intron reverse transcriptase/maturase | EL161_RS02515 | Not Available | Negative | 569369 - 570718 | 51741.8 |
| s9 family peptidase | EL161_RS02520 | Not Available | Negative | 571937 - 574753 | 105621.0 |
| isocitrate dehydrogenase | EL161_RS02525 | Not Available | Positive | 575008 - 576018 | 36277.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | EL161_RS02530 | Not Available | Negative | 576153 - 577238 | 40946.3 |
| duf423 domain-containing protein | EL161_RS02535 | Not Available | Negative | 577392 - 577784 | 13917.3 |
| alpha/beta fold hydrolase | EL161_RS02540 | Not Available | Negative | 577872 - 578543 | 24049.3 |
| transcriptional regulator gcva | EL161_RS02545 | Not Available | Negative | 578524 - 579435 | 33896.8 |
| hypothetical protein | EL161_RS02550 | Not Available | Positive | 579612 - 579845 | 8254.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

