Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination-associated protein rdgc | EL161_RS02445 | Not Available | Positive | 552834 - 553748 | 33609.3 |
| m61 family metallopeptidase | EL161_RS02450 | Not Available | Negative | 553970 - 555781 | 66880.0 |
| tetratricopeptide repeat protein | EL161_RS02455 | Not Available | Positive | 555922 - 558084 | 81754.2 |
| ggdef domain-containing protein | EL161_RS02460 | Not Available | Positive | 558234 - 559790 | 59801.7 |
| nucleotide 5'-monophosphate nucleosidase ppnn | EL161_RS02465 | Not Available | Positive | 559847 - 561202 | 50240.0 |
| flap endonuclease xni | EL161_RS02470 | Not Available | Positive | 561217 - 561999 | 28690.6 |
| duf3192 domain-containing protein | EL161_RS02475 | Not Available | Positive | 562110 - 562538 | 15953.8 |
| integron integrase | EL161_RS02490 | Not Available | Negative | 563548 - 564507 | 36601.2 |
| peptidase s41 | EL161_RS02495 | Not Available | Positive | 564833 - 566092 | 47403.9 |
| aada family aminoglycoside 3''-o-nucleotidyltransferase | EL161_RS02500 | Not Available | Positive | 566110 - 566901 | 29527.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

