Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phna domain-containing protein | EL161_RS02345 | Not Available | Negative | 527711 - 528274 | 20573.4 |
| tonb-dependent receptor domain-containing protein | EL161_RS02350 | Not Available | Negative | 528409 - 530586 | 81898.1 |
| duf2461 domain-containing protein | EL161_RS02355 | Not Available | Positive | 530853 - 531560 | 26668.0 |
| tetr/acrr family transcriptional regulator | EL161_RS02360 | Not Available | Negative | 531648 - 532259 | 23275.9 |
| glutathione s-transferase | EL161_RS02365 | Not Available | Positive | 532415 - 533041 | 23364.9 |
| glutathione s-transferase family protein | EL161_RS02370 | Not Available | Positive | 533103 - 533771 | 25503.8 |
| rsmb/nop family class i sam-dependent rna methyltransferase | EL161_RS02375 | Not Available | Positive | 533950 - 535323 | 51264.9 |
| hypothetical protein | EL161_RS02380 | Not Available | Positive | 535612 - 535770 | 6363.21 |
| nad(p)-binding protein | EL161_RS02385 | Not Available | Positive | 536010 - 539135 | 117625.0 |
| diguanylate cyclase | EL161_RS02390 | Not Available | Negative | 539241 - 540908 | 62760.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

