Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EL161_RS02295 | Not Available | Negative | 516951 - 518294 | 48676.0 |
| abc transporter substrate-binding protein | EL161_RS02300 | Not Available | Positive | 518614 - 519933 | 49049.0 |
| atp-binding protein | EL161_RS02305 | Not Available | Positive | 519978 - 522302 | 87152.6 |
| sigma-54-dependent transcriptional regulator | EL161_RS02310 | Not Available | Positive | 522292 - 523569 | 48485.8 |
| hypothetical protein | EL161_RS02315 | Not Available | Positive | 523736 - 523978 | 8545.3 |
| ygjv family protein | EL161_RS02320 | Not Available | Negative | 523987 - 524493 | 18455.1 |
| crp/fnr family transcriptional regulator | EL161_RS02325 | Not Available | Negative | 524627 - 525235 | 23294.2 |
| fumarylacetoacetate hydrolase family protein | EL161_RS02330 | Not Available | Negative | 525240 - 525866 | 22951.6 |
| succinylglutamate desuccinylase/aspartoacylase family protein | EL161_RS02335 | Not Available | Negative | 525915 - 526928 | 36747.0 |
| marr family winged helix-turn-helix transcriptional regulator | EL161_RS02340 | Not Available | Negative | 526999 - 527535 | 19530.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

