Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EL161_RS02095 | Not Available | Positive | 467424 - 468248 | 29720.8 |
| duf3718 domain-containing protein | EL161_RS02100 | Not Available | Positive | 468471 - 468824 | 12621.2 |
| hd domain-containing phosphohydrolase | EL161_RS02105 | Not Available | Negative | 468977 - 470905 | 72310.6 |
| formyltetrahydrofolate deformylase | EL161_RS02110 | Not Available | Negative | 471115 - 471930 | 30306.7 |
| pts transporter subunit eiic | EL161_RS02115 | Not Available | Negative | 472147 - 473628 | 53979.4 |
| flavodoxin | EL161_RS02120 | Not Available | Negative | 473580 - 474044 | 17122.2 |
| trna pseudouridine(65) synthase truc | EL161_RS02130 | Not Available | Negative | 474474 - 475328 | 32318.3 |
| yqcc family protein | EL161_RS02135 | Not Available | Negative | 475315 - 475635 | 11755.3 |
| duf3549 family protein | EL161_RS02140 | Not Available | Positive | 475782 - 476795 | 38133.7 |
| duf3301 domain-containing protein | EL161_RS02145 | Not Available | Positive | 476792 - 477178 | 14452.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

