Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | EL161_RS22155 | Not Available | Negative | 5027648 - 5028649 | 37219.2 |
| ycgl domain-containing protein | EL161_RS22160 | Not Available | Negative | 5028674 - 5028952 | 10425.8 |
| septum site-determining protein minc | EL161_RS22165 | Not Available | Positive | 5029076 - 5029741 | 23101.9 |
| septum site-determining protein mind | EL161_RS22170 | Not Available | Positive | 5029769 - 5030578 | 29196.3 |
| cell division topological specificity factor mine | EL161_RS22175 | Not Available | Positive | 5030581 - 5030838 | 9871.89 |
| ribonuclease d | EL161_RS22180 | Not Available | Negative | 5030999 - 5032108 | 41757.5 |
| long-chain-fatty-acid--coa ligase fadd | EL161_RS22185 | Not Available | Negative | 5032180 - 5033853 | 61531.8 |
| alpha/beta hydrolase | EL161_RS22190 | Not Available | Negative | 5034053 - 5034919 | 32879.9 |
| class i sam-dependent methyltransferase | EL161_RS22195 | Not Available | Negative | 5034941 - 5035753 | 29682.4 |
| m50 family metallopeptidase | EL161_RS22200 | Not Available | Negative | 5035884 - 5036591 | 25748.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

