Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacylglutathione hydrolase | EL161_RS22105 | Not Available | Positive | 5016165 - 5016968 | 29273.8 |
| lysm peptidoglycan-binding domain-containing protein | EL161_RS22110 | Not Available | Positive | 5017221 - 5018768 | 57380.5 |
| bsupi-related putative proteinase inhibitor | EL161_RS22115 | Not Available | Negative | 5019020 - 5019679 | 23502.6 |
| asma family protein | EL161_RS22120 | Not Available | Negative | 5019682 - 5021502 | 64931.3 |
| putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | EL161_RS22125 | Not Available | Negative | 5021545 - 5022039 | 17770.6 |
| hypothetical protein | EL161_RS22130 | Not Available | Positive | 5022259 - 5022579 | 12285.7 |
| duf885 domain-containing protein | EL161_RS22135 | Not Available | Negative | 5022781 - 5024571 | 68037.7 |
| dead/deah box helicase | EL161_RS22140 | Not Available | Positive | 5024883 - 5026358 | 53756.6 |
| peptidylprolyl isomerase | EL161_RS22145 | Not Available | Positive | 5026404 - 5026904 | 18387.1 |
| ycgn family cysteine cluster protein | EL161_RS22150 | Not Available | Negative | 5027150 - 5027590 | 16709.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

