Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma e protease regulator rsep | EL161_RS02045 | Not Available | Negative | 456158 - 457528 | 49649.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EL161_RS02050 | Not Available | Negative | 457578 - 458768 | 42028.0 |
| phosphatidate cytidylyltransferase | EL161_RS02055 | Not Available | Negative | 458773 - 459630 | 30944.2 |
| polyprenyl diphosphate synthase | EL161_RS02060 | Not Available | Negative | 459651 - 460478 | 30872.8 |
| ribosome recycling factor | EL161_RS02065 | Not Available | Negative | 460561 - 461118 | 20629.9 |
| ump kinase | EL161_RS02070 | Not Available | Negative | 461148 - 461876 | 26222.2 |
| translation elongation factor ts | EL161_RS02075 | Not Available | Negative | 461946 - 462797 | 30459.6 |
| 30s ribosomal protein s2 | EL161_RS02080 | Not Available | Negative | 462917 - 463645 | 26571.0 |
| type i methionyl aminopeptidase | EL161_RS02085 | Not Available | Positive | 463954 - 464751 | 29431.4 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | EL161_RS02090 | Not Available | Positive | 464820 - 467405 | 98146.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

