Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii glutamine amidotransferase | EL161_RS22055 | Not Available | Negative | 5005141 - 5005920 | 29352.0 |
| acyl-coa dehydrogenase fade | EL161_RS22060 | Not Available | Positive | 5006164 - 5008611 | 89349.4 |
| cation:proton antiporter | EL161_RS22065 | Not Available | Negative | 5008751 - 5010763 | 72594.6 |
| Trna-asp | Not Available | Not Available | Positive | 5011050 - 5011126 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 5011183 - 5011259 | Not Available |
| tigr03503 family protein | EL161_RS22080 | Not Available | Negative | 5011427 - 5013001 | 57247.3 |
| dna polymerase iii subunit epsilon | EL161_RS22085 | Not Available | Negative | 5013012 - 5013740 | 26779.9 |
| ribonuclease hi | EL161_RS22090 | Not Available | Positive | 5013811 - 5014287 | 17706.1 |
| lysr substrate-binding domain-containing protein | EL161_RS22095 | Not Available | Negative | 5014324 - 5015223 | 32998.7 |
| class i sam-dependent methyltransferase | EL161_RS22100 | Not Available | Negative | 5015247 - 5015981 | 27519.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

