Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 13 protein | EL161_RS22005 | Not Available | Positive | 4994465 - 4996510 | 76312.8 |
| alpha-amylase family protein | EL161_RS22010 | Not Available | Positive | 4996598 - 4998727 | 78578.1 |
| voc family protein | EL161_RS22015 | Not Available | Positive | 4998845 - 4999228 | 14595.5 |
| hypothetical protein | EL161_RS22020 | Not Available | Positive | 4999438 - 4999647 | 7607.76 |
| hypothetical protein | EL161_RS22025 | Not Available | Negative | 5000088 - 5000852 | 29408.1 |
| duf4274 domain-containing protein | EL161_RS22030 | Not Available | Negative | 5001287 - 5001727 | 17211.8 |
| rhombotarget lipoprotein | EL161_RS22035 | Not Available | Negative | 5001853 - 5002701 | 31301.8 |
| peptide deformylase | EL161_RS22040 | Not Available | Negative | 5002912 - 5003403 | 18249.1 |
| mgmt family protein | EL161_RS22045 | Not Available | Positive | 5003614 - 5004054 | 16538.0 |
| duf3108 domain-containing protein | EL161_RS22050 | Not Available | Positive | 5004184 - 5004981 | 30180.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

