Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa pyrophosphatase | EL161_RS21955 | Not Available | Positive | 4978948 - 4979535 | 22075.7 |
| hypothetical protein | EL161_RS21960 | Not Available | Negative | 4979559 - 4979894 | 12762.7 |
| asparagine--trna ligase | EL161_RS21965 | Not Available | Positive | 4980046 - 4981446 | 52264.8 |
| d-alanine--d-alanine ligase | EL161_RS21970 | Not Available | Positive | 4981710 - 4982720 | 37457.3 |
| eal domain-containing protein | EL161_RS21975 | Not Available | Negative | 4982773 - 4985031 | 84448.7 |
| rsmb/nop family class i sam-dependent rna methyltransferase | EL161_RS21980 | Not Available | Negative | 4985184 - 4986398 | 44933.4 |
| sugar mfs transporter | EL161_RS21985 | Not Available | Negative | 4986551 - 4987822 | 44222.6 |
| alpha-glucosidase | EL161_RS21990 | Not Available | Negative | 4987949 - 4989571 | 62212.2 |
| tonb-dependent receptor | EL161_RS21995 | Not Available | Positive | 4990070 - 4992793 | 98823.4 |
| tryptophan halogenase family protein | EL161_RS22000 | Not Available | Positive | 4992905 - 4994395 | 55790.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

