Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | EL161_RS01995 | Not Available | Positive | 442875 - 443765 | 32928.4 |
| trna lysidine(34) synthetase tils | EL161_RS02000 | Not Available | Negative | 443816 - 445213 | 51931.9 |
| dna polymerase iii subunit alpha | EL161_RS02005 | Not Available | Negative | 445293 - 448769 | 129767.0 |
| ribonuclease hii | EL161_RS02010 | Not Available | Negative | 448887 - 449516 | 22573.2 |
| lipid-a-disaccharide synthase | EL161_RS02015 | Not Available | Negative | 449516 - 450673 | 42438.2 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | EL161_RS02020 | Not Available | Negative | 450790 - 451560 | 27779.2 |
| 3-hydroxyacyl-acp dehydratase fabz | EL161_RS02025 | Not Available | Negative | 451557 - 452021 | 17448.3 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | EL161_RS02030 | Not Available | Negative | 452054 - 453079 | 35807.5 |
| omph family outer membrane protein | EL161_RS02035 | Not Available | Negative | 453083 - 453580 | 18559.6 |
| outer membrane protein assembly factor bama | EL161_RS02040 | Not Available | Negative | 453646 - 456126 | 92378.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

