Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | EL161_RS21500 | Not Available | Negative | 4872994 - 4873428 | 16155.6 |
| ggdef domain-containing protein | EL161_RS21505 | Not Available | Negative | 4873860 - 4874888 | 38150.5 |
| phosphoethanolamine transferase | EL161_RS21510 | Not Available | Negative | 4875049 - 4876674 | 61274.8 |
| prolyl oligopeptidase family serine peptidase | EL161_RS21515 | Not Available | Negative | 4876928 - 4879021 | 77903.3 |
| marr family winged helix-turn-helix transcriptional regulator | EL161_RS21525 | Not Available | Negative | 4879558 - 4880019 | 17283.8 |
| cdf family co(ii)/ni(ii) efflux transporter dmef | EL161_RS21530 | Not Available | Negative | 4880019 - 4881257 | 45751.3 |
| lactoylglutathione lyase | EL161_RS21535 | Not Available | Positive | 4881987 - 4882397 | 14737.5 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | EL161_RS21540 | Not Available | Negative | 4882492 - 4883139 | 24407.9 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | EL161_RS21545 | Not Available | Negative | 4883254 - 4884288 | 38841.6 |
| dna recombination protein rmuc | EL161_RS21550 | Not Available | Positive | 4884562 - 4886175 | 61642.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

