Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 4820447 - 4820531 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 4820571 - 4820655 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 4820695 - 4820779 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 4820910 - 4820994 | Not Available |
| is200/is605 family transposase | EL161_RS21270 | Not Available | Negative | 4821179 - 4821579 | 15753.7 |
| 7-carboxy-7-deazaguanine synthase quee | EL161_RS21275 | Not Available | Negative | 4821753 - 4822421 | 24591.4 |
| 7-cyano-7-deazaguanine synthase quec | EL161_RS21280 | Not Available | Positive | 4822610 - 4823329 | 26421.8 |
| rhombosortase | EL161_RS21285 | Not Available | Positive | 4823326 - 4823943 | 23059.9 |
| excinuclease abc subunit uvrb | EL161_RS21290 | Not Available | Negative | 4824088 - 4826109 | 76174.3 |
| hypothetical protein | EL161_RS21295 | Not Available | Negative | 4826821 - 4827024 | 7577.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

