Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate kinase | EL161_RS21200 | Not Available | Positive | 4808271 - 4809710 | 51092.7 |
| acyl-coa dehydrogenase | EL161_RS21205 | Not Available | Negative | 4809851 - 4812130 | 83504.6 |
| tetr/acrr family transcriptional regulator | EL161_RS21210 | Not Available | Negative | 4812146 - 4812784 | 23377.1 |
| m2 family metallopeptidase | EL161_RS21215 | Not Available | Positive | 4813003 - 4814862 | 68902.6 |
| dna endonuclease smra | EL161_RS21220 | Not Available | Negative | 4815032 - 4815622 | 21863.7 |
| hypothetical protein | EL161_RS21225 | Not Available | Positive | 4815755 - 4816333 | 22030.3 |
| ychj family protein | EL161_RS21230 | Not Available | Positive | 4816361 - 4816855 | 18624.3 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | EL161_RS21235 | Not Available | Negative | 4816935 - 4819118 | 82624.7 |
| duf406 family protein | EL161_RS21240 | Not Available | Negative | 4819307 - 4819594 | 10152.0 |
| vc2046/so_2500 family protein | EL161_RS21245 | Not Available | Negative | 4819833 - 4820321 | 17985.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

