Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3-like element isshes13 family transposase | EL161_RS21150 | Not Available | Negative | 4795135 - 4796351 | 46835.3 |
| na+/h+ antiporter nhac family protein | EL161_RS21155 | Not Available | Negative | 4796621 - 4798003 | 49208.5 |
| pyridoxal phosphate-dependent aminotransferase | EL161_RS21160 | Not Available | Positive | 4798744 - 4799958 | 45337.8 |
| 5'-deoxynucleotidase | EL161_RS21165 | Not Available | Positive | 4800213 - 4800800 | 22348.0 |
| anti-phage deoxyguanosine triphosphatase | EL161_RS21170 | Not Available | Positive | 4800826 - 4802166 | 50707.5 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | EL161_RS21175 | Not Available | Negative | 4802237 - 4802878 | 22273.2 |
| phosphogluconate dehydratase | EL161_RS21180 | Not Available | Negative | 4802899 - 4804725 | 64499.8 |
| 6-phosphogluconolactonase | EL161_RS21185 | Not Available | Negative | 4804738 - 4805436 | 25486.3 |
| glucose-6-phosphate dehydrogenase | EL161_RS21190 | Not Available | Negative | 4805446 - 4806918 | 55883.7 |
| murr/rpir family transcriptional regulator | EL161_RS21195 | Not Available | Positive | 4807231 - 4808085 | 31420.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

