Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omca/mtrc family decaheme c-type cytochrome | EL161_RS01945 | Not Available | Positive | 427207 - 429468 | 78297.4 |
| duf2982 domain-containing protein | EL161_RS01950 | Not Available | Negative | 429561 - 430256 | 25696.4 |
| ydcf family protein | EL161_RS01955 | Not Available | Negative | 430261 - 430959 | 25524.1 |
| fructokinase | EL161_RS01960 | Not Available | Negative | 431103 - 432023 | 32356.8 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | EL161_RS01965 | Not Available | Negative | 432086 - 432892 | 29348.8 |
| sdr family oxidoreductase | EL161_RS01970 | Not Available | Negative | 433239 - 434363 | 40300.0 |
| phosphatase | EL161_RS01975 | Not Available | Negative | 434401 - 435159 | 27256.5 |
| dead/deah box helicase | EL161_RS01980 | Not Available | Negative | 435247 - 438486 | 120929.0 |
| duf885 domain-containing protein | EL161_RS01985 | Not Available | Negative | 438671 - 440494 | 68588.9 |
| monovalent cation:proton antiporter family protein | EL161_RS01990 | Not Available | Negative | 440758 - 442704 | 71453.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

