Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 4776448 - 4776521 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4776545 - 4776620 | Not Available |
| glyceraldehyde-3-phosphate dehydrogenase | EL161_RS21060 | Not Available | Negative | 4776946 - 4778379 | 52252.6 |
| duf2989 domain-containing protein | EL161_RS21065 | Not Available | Positive | 4778586 - 4779473 | 33551.8 |
| type i glyceraldehyde-3-phosphate dehydrogenase | EL161_RS21070 | Not Available | Positive | 4779686 - 4780696 | 36377.4 |
| superoxide dismutase family protein | EL161_RS21075 | Not Available | Negative | 4780822 - 4781334 | 17243.7 |
| quinolinate synthase nada | EL161_RS21080 | Not Available | Negative | 4781626 - 4782699 | 38790.8 |
| dihydrolipoyllysine-residue acetyltransferase | EL161_RS21085 | Not Available | Negative | 4782844 - 4784439 | 56511.2 |
| alpha-ketoacid dehydrogenase subunit beta | EL161_RS21090 | Not Available | Negative | 4784449 - 4785426 | 35479.3 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | EL161_RS21095 | Not Available | Negative | 4785430 - 4786608 | 43577.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

