Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | EL161_RS20950 | Not Available | Negative | 4757695 - 4758990 | 49414.7 |
| hypothetical protein | EL161_RS22610 | Not Available | Negative | 4759052 - 4759270 | 8205.05 |
| duf3369 domain-containing protein | EL161_RS20960 | Not Available | Positive | 4759442 - 4761028 | 59386.3 |
| hypothetical protein | EL161_RS20965 | Not Available | Negative | 4761128 - 4761613 | 18044.3 |
| cytochrome-c oxidase, cbb3-type subunit i | EL161_RS20970 | Not Available | Positive | 4761837 - 4763273 | 53538.9 |
| cytochrome-c oxidase, cbb3-type subunit ii | EL161_RS20975 | Not Available | Positive | 4763286 - 4763912 | 23400.0 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | EL161_RS20980 | Not Available | Positive | 4763924 - 4764100 | 6538.7 |
| cytochrome-c oxidase, cbb3-type subunit iii | EL161_RS20985 | Not Available | Positive | 4764100 - 4765068 | 35168.3 |
| fixh family protein | EL161_RS20990 | Not Available | Positive | 4765179 - 4765658 | 18523.2 |
| heavy metal translocating p-type atpase | EL161_RS20995 | Not Available | Positive | 4765681 - 4768080 | 86240.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

