Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | EL161_RS20850 | Not Available | Positive | 4746124 - 4746513 | 14473.5 |
| hypothetical protein | EL161_RS20855 | Not Available | Positive | 4747119 - 4747370 | 9380.11 |
| hypothetical protein | EL161_RS20860 | Not Available | Negative | 4747540 - 4747725 | 7374.69 |
| hypothetical protein | EL161_RS20865 | Not Available | Negative | 4747716 - 4747901 | 6743.12 |
| single-stranded dna-binding protein | EL161_RS20870 | Not Available | Negative | 4747917 - 4748216 | 10954.3 |
| phage/plasmid replication protein, ii/x family | EL161_RS20875 | Not Available | Negative | 4748228 - 4749346 | 42604.2 |
| helix-turn-helix domain-containing protein | EL161_RS20880 | Not Available | Positive | 4749495 - 4749884 | 14473.5 |
| hypothetical protein | EL161_RS20885 | Not Available | Positive | 4750490 - 4750741 | 9380.11 |
| hypothetical protein | EL161_RS20890 | Not Available | Negative | 4750911 - 4751096 | 7374.69 |
| hypothetical protein | EL161_RS20895 | Not Available | Negative | 4751087 - 4751272 | 6743.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

