Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr/gntr family transcriptional regulator | EL161_RS20705 | Not Available | Positive | 4706398 - 4707114 | 26642.5 |
| glycoside hydrolase family 43 protein | EL161_RS20710 | Not Available | Negative | 4707202 - 4708149 | 35145.1 |
| ilvd/edd family dehydratase | EL161_RS20715 | Not Available | Positive | 4708326 - 4710059 | 62119.1 |
| sdr family nad(p)-dependent oxidoreductase | EL161_RS20720 | Not Available | Positive | 4710120 - 4710890 | 28092.7 |
| aldose epimerase family protein | EL161_RS20725 | Not Available | Positive | 4710970 - 4712025 | 38921.6 |
| abc transporter substrate-binding protein | EL161_RS20730 | Not Available | Positive | 4712124 - 4713065 | 33855.3 |
| sugar abc transporter atp-binding protein | EL161_RS20735 | Not Available | Positive | 4713097 - 4714596 | 54363.5 |
| abc transporter permease | EL161_RS20740 | Not Available | Positive | 4714597 - 4715814 | 42305.6 |
| galactofuranose abc transporter, permease protein yjff | EL161_RS20745 | Not Available | Positive | 4715811 - 4716773 | 34147.8 |
| family 43 glycosylhydrolase | EL161_RS20750 | Not Available | Positive | 4716748 - 4717884 | 42918.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

