Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase | EL161_RS20555 | Not Available | Positive | 4679231 - 4679851 | 22534.0 |
| cpxcg motif-containing cysteine-rich protein | EL161_RS20560 | Not Available | Negative | 4679861 - 4680061 | 7758.12 |
| hypothetical protein | EL161_RS20565 | Not Available | Negative | 4680282 - 4680542 | 9356.28 |
| threonine--trna ligase | EL161_RS20570 | Not Available | Positive | 4680918 - 4682846 | 73707.3 |
| translation initiation factor if-3 | EL161_RS20575 | Not Available | Positive | 4682850 - 4683392 | 20450.9 |
| 50s ribosomal protein l35 | EL161_RS20580 | Not Available | Positive | 4683478 - 4683672 | 7466.49 |
| 50s ribosomal protein l20 | EL161_RS20585 | Not Available | Positive | 4683689 - 4684045 | 13567.7 |
| thioredoxin-disulfide reductase | EL161_RS20590 | Not Available | Negative | 4684242 - 4685195 | 34101.6 |
| alanine dehydrogenase | EL161_RS20595 | Not Available | Negative | 4685446 - 4686561 | 39060.8 |
| leucine-responsive transcriptional regulator lrp | EL161_RS20600 | Not Available | Positive | 4686742 - 4687248 | 19178.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

