Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| brex-1 system adenine-specific dna-methyltransferase pglx | EL161_RS20460 | Not Available | Positive | 4656288 - 4658018 | 66057.1 |
| brex-1 system phosphatase pglz type a | EL161_RS20465 | Not Available | Positive | 4658108 - 4660792 | 100459.0 |
| protease lon-related brex system protein brxl | EL161_RS20470 | Not Available | Positive | 4660880 - 4663126 | 83240.0 |
| hypothetical protein | EL161_RS20475 | Not Available | Positive | 4663708 - 4664319 | 23082.0 |
| hypothetical protein | EL161_RS22385 | Not Available | Positive | 4664501 - 4664668 | 6388.32 |
| is5-like element isspu11 family transposase | EL161_RS20480 | Not Available | Negative | 4665482 - 4666405 | 34902.5 |
| duf2971 domain-containing protein | EL161_RS20485 | Not Available | Positive | 4666749 - 4667690 | 36196.3 |
| duf4238 domain-containing protein | EL161_RS20490 | Not Available | Positive | 4667961 - 4670345 | 90858.6 |
| hypothetical protein | EL161_RS20495 | Not Available | Positive | 4670416 - 4671531 | 42137.1 |
| hypothetical protein | EL161_RS20500 | Not Available | Negative | 4671975 - 4672364 | 14866.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

