Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03986 family crispr-associated ramp protein | EL161_RS20365 | Not Available | Negative | 4631189 - 4633483 | 85863.9 |
| hypothetical protein | EL161_RS20370 | Not Available | Negative | 4633485 - 4634006 | 20043.7 |
| ramp superfamily crispr-associated protein | EL161_RS20375 | Not Available | Negative | 4634010 - 4635419 | 52126.7 |
| hypothetical protein | EL161_RS20380 | Not Available | Negative | 4635422 - 4636954 | 57303.4 |
| ramp superfamily crispr-associated protein | EL161_RS20385 | Not Available | Negative | 4636954 - 4637553 | 21997.4 |
| cas10/cmr2 second palm domain-containing protein | EL161_RS20390 | Not Available | Negative | 4637550 - 4639274 | 63824.9 |
| crispr-associated ring nuclease csm6 | EL161_RS20395 | Not Available | Positive | 4640046 - 4640504 | 16821.2 |
| hypothetical protein | EL161_RS20400 | Not Available | Negative | 4641053 - 4641385 | 12546.0 |
| hd domain-containing protein | EL161_RS20405 | Not Available | Negative | 4641422 - 4642270 | 31897.3 |
| site-specific integrase | EL161_RS20410 | Not Available | Negative | 4642272 - 4643486 | 47182.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

