Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase c-terminal domain-containing protein | EL161_RS20315 | Not Available | Negative | 4619620 - 4621851 | 83763.9 |
| hypothetical protein | EL161_RS20320 | Not Available | Negative | 4621865 - 4622155 | 11000.9 |
| crispr-associated protein csx16 | EL161_RS20325 | Not Available | Negative | 4622463 - 4622765 | 11443.0 |
| gtpase family protein | EL161_RS20330 | Not Available | Negative | 4622762 - 4623550 | 29512.0 |
| gtpase | EL161_RS20335 | Not Available | Negative | 4623550 - 4624428 | 31801.5 |
| ykva family protein | EL161_RS20340 | Not Available | Negative | 4624495 - 4624833 | 12249.0 |
| hypothetical protein | EL161_RS20345 | Not Available | Negative | 4626829 - 4627335 | 19106.6 |
| crispr-associated ring nuclease csm6 | EL161_RS20350 | Not Available | Negative | 4627642 - 4628913 | 47862.1 |
| card1-like endonuclease domain-containing protein | EL161_RS20355 | Not Available | Negative | 4629042 - 4630235 | 44576.0 |
| crispr system precrrna processing endoribonuclease ramp protein cas6 | EL161_RS20360 | Not Available | Negative | 4630314 - 4631192 | 32804.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

