Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EL161_RS20260 | Not Available | Positive | 4604760 - 4605341 | 22029.1 |
| hypothetical protein | EL161_RS20265 | Not Available | Positive | 4605338 - 4607875 | 97248.6 |
| site-specific integrase | EL161_RS20270 | Not Available | Positive | 4607845 - 4610949 | 118960.0 |
| duf6977 family protein | EL161_RS20275 | Not Available | Negative | 4611136 - 4611831 | 25869.9 |
| crispr-associated ring nuclease csm6 | EL161_RS20280 | Not Available | Negative | 4611867 - 4613153 | 48411.4 |
| dart ssdna thymidine adp-ribosyltransferase family protein | EL161_RS20285 | Not Available | Negative | 4613173 - 4613853 | 25815.8 |
| crispr-associated endonuclease cas2 | EL161_RS20290 | Not Available | Negative | 4616440 - 4616757 | 12542.1 |
| crispr-associated endonuclease cas1 | EL161_RS20295 | Not Available | Negative | 4616744 - 4617703 | 36824.5 |
| toprim domain-containing protein | EL161_RS20305 | Not Available | Negative | 4618009 - 4619031 | 37964.4 |
| single-stranded dna-binding protein | EL161_RS20310 | Not Available | Negative | 4619032 - 4619619 | 22009.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

