Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | EL161_RS20160 | Not Available | Positive | 4580133 - 4580615 | 18237.5 |
| tigr03571 family llm class oxidoreductase | EL161_RS20165 | Not Available | Positive | 4580624 - 4581577 | 35558.5 |
| lysr family transcriptional regulator | EL161_RS20170 | Not Available | Positive | 4581823 - 4582734 | 33382.6 |
| efflux transporter outer membrane subunit | EL161_RS20175 | Not Available | Negative | 4582864 - 4584300 | 51050.0 |
| efflux rnd transporter permease subunit | EL161_RS20180 | Not Available | Negative | 4584293 - 4587370 | 109625.0 |
| efflux rnd transporter periplasmic adaptor subunit | EL161_RS20185 | Not Available | Negative | 4587376 - 4588506 | 40140.1 |
| redox-sensitive transcriptional activator soxr | EL161_RS20190 | Not Available | Positive | 4588702 - 4589142 | 16049.4 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | EL161_RS20195 | Not Available | Negative | 4589243 - 4592380 | 118779.0 |
| lysr family transcriptional regulator | EL161_RS20200 | Not Available | Negative | 4592993 - 4593880 | 33015.7 |
| cupin domain-containing protein | EL161_RS20205 | Not Available | Positive | 4594253 - 4594636 | 13889.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

