Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase family protein | EL161_RS20110 | Not Available | Negative | 4565489 - 4566799 | 48527.6 |
| exopolysaccharide biosynthesis protein | EL161_RS20115 | Not Available | Negative | 4566754 - 4568166 | 51379.4 |
| polysaccharide biosynthesis/export family protein | EL161_RS20120 | Not Available | Negative | 4568248 - 4569516 | 45774.4 |
| stas domain-containing protein | EL161_RS20125 | Not Available | Negative | 4569552 - 4569893 | 12880.7 |
| atp-binding protein | EL161_RS20130 | Not Available | Negative | 4570116 - 4570511 | 15514.7 |
| pp2c family protein-serine/threonine phosphatase | EL161_RS20135 | Not Available | Negative | 4570508 - 4571743 | 45804.3 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | EL161_RS20140 | Not Available | Positive | 4572055 - 4572957 | 33086.9 |
| pas domain s-box protein | EL161_RS20145 | Not Available | Positive | 4572959 - 4576318 | 124116.0 |
| sigma-54-dependent transcriptional regulator | EL161_RS20150 | Not Available | Positive | 4576327 - 4577835 | 55946.8 |
| methyl-accepting chemotaxis protein | EL161_RS20155 | Not Available | Negative | 4578069 - 4579700 | 59224.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

