Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EL161_RS00015 | Not Available | Negative | 2059 - 3081 | 38247.0 |
| is200/is605 family transposase | EL161_RS00020 | Not Available | Negative | 3183 - 4096 | 32704.7 |
| diacylglycerol kinase | EL161_RS00025 | Not Available | Positive | 4349 - 4720 | 13441.2 |
| hth-type transcriptional regulator hdfr | EL161_RS00030 | Not Available | Negative | 4888 - 5745 | 31567.1 |
| duf413 domain-containing protein | EL161_RS00035 | Not Available | Positive | 5854 - 6306 | 16574.2 |
| atp-grasp domain-containing protein | EL161_RS00040 | Not Available | Positive | 6327 - 7343 | 37483.9 |
| duf481 domain-containing protein | EL161_RS00045 | Not Available | Positive | 7643 - 8506 | 32229.1 |
| m28 family metallopeptidase | EL161_RS00050 | Not Available | Negative | 8564 - 10189 | 59147.1 |
| ggdef domain-containing protein | EL161_RS00055 | Not Available | Positive | 10350 - 11375 | 38695.5 |
| class gn sortase | EL161_RS00060 | Not Available | Negative | 11602 - 12285 | 24463.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

