Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux mfs transporter emrd | EL161_RS20015 | Not Available | Negative | 4538380 - 4539624 | 44338.3 |
| class c beta-lactamase | EL161_RS20020 | Not Available | Negative | 4539981 - 4541111 | 40598.7 |
| pp_03852 | EL161_RS20025 | Not Available | Positive | 4541703 - 4542467 | Not Available |
| efflux rnd transporter periplasmic adaptor subunit | EL161_RS20030 | Not Available | Positive | 4542722 - 4543789 | 39101.0 |
| hypothetical protein | EL161_RS22590 | Not Available | Positive | 4543793 - 4543978 | 6910.35 |
| is200/is605 family transposase | EL161_RS20035 | Not Available | Positive | 4543978 - 4547145 | 113791.0 |
| efflux transporter outer membrane subunit | EL161_RS20040 | Not Available | Positive | 4547138 - 4548631 | 55104.7 |
| phox family protein | EL161_RS20045 | Not Available | Negative | 4548680 - 4550737 | 74425.3 |
| tyrosine-type recombinase/integrase | EL161_RS20050 | Not Available | Negative | 4550935 - 4552044 | 42088.8 |
| hypothetical protein | EL161_RS20055 | Not Available | Positive | 4552671 - 4553171 | 19440.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

