Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lapa family protein | EL161_RS19965 | Not Available | Positive | 4528773 - 4529048 | 9986.62 |
| lipopolysaccharide assembly protein lapb | EL161_RS19970 | Not Available | Positive | 4529050 - 4530210 | 44289.5 |
| orotidine-5'-phosphate decarboxylase | EL161_RS19975 | Not Available | Positive | 4530253 - 4530948 | 24845.4 |
| sdr family oxidoreductase | EL161_RS19980 | Not Available | Positive | 4531021 - 4531848 | 28407.2 |
| duf2058 domain-containing protein | EL161_RS19985 | Not Available | Positive | 4531907 - 4532449 | 20658.7 |
| acyl-coa dehydrogenase family protein | EL161_RS19990 | Not Available | Positive | 4532668 - 4534425 | 63261.7 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | EL161_RS19995 | Not Available | Negative | 4534532 - 4536073 | 55611.1 |
| hypothetical protein | EL161_RS20000 | Not Available | Negative | 4536100 - 4536276 | 6629.53 |
| duf1904 domain-containing protein | EL161_RS20005 | Not Available | Positive | 4536669 - 4537001 | 12337.0 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | EL161_RS20010 | Not Available | Positive | 4537013 - 4538326 | 49988.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

