Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class 1a ribonucleoside-diphosphate reductase subunit alpha | EL161_RS19915 | Not Available | Negative | 4513979 - 4516267 | 85958.8 |
| had family hydrolase | EL161_RS19920 | Not Available | Negative | 4516755 - 4517429 | 23888.8 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | EL161_RS19925 | Not Available | Negative | 4517431 - 4518141 | 26427.9 |
| dna gyrase subunit a | EL161_RS19930 | Not Available | Positive | 4518527 - 4521283 | 101384.0 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EL161_RS19935 | Not Available | Positive | 4521389 - 4522480 | 39723.8 |
| amino acid aminotransferase | EL161_RS19940 | Not Available | Negative | 4522737 - 4523927 | 43432.3 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EL161_RS19945 | Not Available | Positive | 4524363 - 4525643 | 45635.1 |
| (d)cmp kinase | EL161_RS19950 | Not Available | Positive | 4525827 - 4526519 | 25226.0 |
| 30s ribosomal protein s1 | EL161_RS19955 | Not Available | Positive | 4526622 - 4528289 | 61242.6 |
| integration host factor subunit beta | EL161_RS19960 | Not Available | Positive | 4528362 - 4528649 | 10648.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

