Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxy-s-adenosyl-l-methionine synthase cmoa | EL161_RS19815 | Not Available | Negative | 4486284 - 4487015 | 27483.7 |
| diguanylate cyclase domain-containing protein | EL161_RS19820 | Not Available | Positive | 4487164 - 4489977 | 104280.0 |
| aspartate--trna ligase | EL161_RS19825 | Not Available | Positive | 4490162 - 4491937 | 65996.2 |
| yebc/pmpr family dna-binding transcriptional regulator | EL161_RS19830 | Not Available | Positive | 4492154 - 4492900 | 26782.2 |
| crossover junction endodeoxyribonuclease ruvc | EL161_RS19835 | Not Available | Positive | 4493174 - 4493695 | 18595.5 |
| holliday junction branch migration protein ruva | EL161_RS19840 | Not Available | Positive | 4493692 - 4494309 | 22471.4 |
| holliday junction branch migration dna helicase ruvb | EL161_RS19845 | Not Available | Positive | 4494430 - 4495434 | 36836.7 |
| is3 family transposase | EL161_RS19850 | Not Available | Negative | 4495490 - 4496706 | 47121.6 |
| tonb-dependent receptor plug domain-containing protein | EL161_RS19855 | Not Available | Positive | 4497717 - 4500320 | 93373.8 |
| is3 family transposase | EL161_RS19860 | Not Available | Positive | 4500429 - 4501645 | 47035.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

