Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-iminoacetate synthase thih | EL161_RS19765 | Not Available | Positive | 4473820 - 4474935 | 41959.6 |
| chemotaxis protein | EL161_RS19770 | Not Available | Positive | 4475060 - 4475323 | 9000.46 |
| putative metalloprotease cjm1_0395 family protein | EL161_RS19775 | Not Available | Positive | 4475326 - 4477461 | 73240.6 |
| lysr family transcriptional regulator | EL161_RS19780 | Not Available | Negative | 4477638 - 4478540 | 33555.8 |
| duf3541 domain-containing protein | EL161_RS19785 | Not Available | Negative | 4478714 - 4479913 | 44727.3 |
| m3 family metallopeptidase | EL161_RS19790 | Not Available | Negative | 4479840 - 4481747 | 70609.2 |
| alpha-l-glutamate ligase-like protein | EL161_RS19795 | Not Available | Negative | 4481722 - 4482666 | 34466.9 |
| uup1 family membrane protein | EL161_RS19800 | Not Available | Negative | 4482666 - 4484174 | 55644.2 |
| atp-dependent zinc protease | EL161_RS19805 | Not Available | Negative | 4484384 - 4485211 | 30095.6 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | EL161_RS19810 | Not Available | Negative | 4485295 - 4486287 | 37826.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

