Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translesion error-prone dna polymerase v autoproteolytic subunit | EL161_RS19665 | Not Available | Negative | 4450037 - 4450432 | 14317.3 |
| slc13 family permease | EL161_RS19670 | Not Available | Negative | 4450717 - 4452105 | 49537.5 |
| arac family transcriptional regulator | EL161_RS19675 | Not Available | Positive | 4452185 - 4452997 | 30181.3 |
| glucan 1,4-alpha-glucosidase | EL161_RS19680 | Not Available | Negative | 4453180 - 4455696 | 90824.1 |
| mfs transporter | EL161_RS19685 | Not Available | Negative | 4455826 - 4457421 | 58217.4 |
| ycii family protein | EL161_RS19690 | Not Available | Positive | 4458165 - 4458458 | 10751.1 |
| alpha/beta fold hydrolase | EL161_RS19695 | Not Available | Positive | 4458605 - 4459483 | 33231.2 |
| is200/is605 family transposase | EL161_RS19700 | Not Available | Positive | 4459538 - 4459696 | 6093.0 |
| carboxymuconolactone decarboxylase family protein | EL161_RS19705 | Not Available | Negative | 4459765 - 4460214 | 16902.1 |
| helix-turn-helix domain-containing protein | EL161_RS19710 | Not Available | Negative | 4460251 - 4461135 | 33606.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

