Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding protein | EL161_RS01795 | Not Available | Positive | 392213 - 394903 | 100952.0 |
| dmt family transporter | EL161_RS01800 | Not Available | Positive | 395079 - 395975 | 32548.1 |
| lipocalin family protein | EL161_RS01805 | Not Available | Positive | 396044 - 396574 | 20000.8 |
| abc-f family atpase | EL161_RS01810 | Not Available | Negative | 396711 - 398303 | 59614.2 |
| heavy metal translocating p-type atpase | EL161_RS01815 | Not Available | Negative | 398791 - 401067 | 79689.6 |
| cu(i)-responsive transcriptional regulator | EL161_RS01820 | Not Available | Positive | 401205 - 401594 | 14844.7 |
| prolyl oligopeptidase family serine peptidase | EL161_RS01825 | Not Available | Negative | 401719 - 403752 | 74260.6 |
| hypothetical protein | EL161_RS01830 | Not Available | Negative | 403810 - 404052 | 9430.1 |
| sdr family oxidoreductase | EL161_RS01835 | Not Available | Negative | 404260 - 405018 | 26456.9 |
| 3-hydroxyisobutyrate dehydrogenase | EL161_RS01840 | Not Available | Negative | 405038 - 405940 | 30644.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

