Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hyad/hybd family hydrogenase maturation endopeptidase | EL161_RS19470 | Not Available | Negative | 4400217 - 4400795 | 21187.4 |
| ni/fe-hydrogenase, b-type cytochrome subunit | EL161_RS19475 | Not Available | Negative | 4400803 - 4401477 | 25778.7 |
| nickel-dependent hydrogenase large subunit | EL161_RS19480 | Not Available | Negative | 4401499 - 4403202 | 62289.9 |
| nickel-dependent hydrogenase small subunit | EL161_RS19485 | Not Available | Negative | 4403206 - 4404342 | 41074.1 |
| tlpa disulfide reductase family protein | EL161_RS19490 | Not Available | Positive | 4404693 - 4405160 | 17444.9 |
| duf4266 domain-containing protein | EL161_RS19495 | Not Available | Positive | 4405164 - 4405385 | 7610.11 |
| duf3570 domain-containing protein | EL161_RS19500 | Not Available | Positive | 4405478 - 4406836 | 49995.7 |
| fad:protein fmn transferase | EL161_RS19505 | Not Available | Positive | 4406933 - 4407835 | 33103.5 |
| response regulator transcription factor | EL161_RS19510 | Not Available | Positive | 4407846 - 4408505 | 24461.5 |
| atp-binding protein | EL161_RS19515 | Not Available | Positive | 4408619 - 4410013 | 52300.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

