Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase/urease nickel incorporation protein hypa | EL161_RS19420 | Not Available | Negative | 4387802 - 4388158 | 13377.1 |
| hydrogenase expression/formation protein hype | EL161_RS19425 | Not Available | Negative | 4388158 - 4389177 | 36061.6 |
| hydrogenase formation protein hypd | EL161_RS19430 | Not Available | Negative | 4389170 - 4390309 | 41838.6 |
| hypc/hybg/hupf family hydrogenase formation chaperone | EL161_RS19435 | Not Available | Negative | 4390368 - 4390613 | 9082.98 |
| hydrogenase nickel incorporation protein hypb | EL161_RS19440 | Not Available | Negative | 4390613 - 4391374 | 28137.5 |
| fdhf/ydep family oxidoreductase | EL161_RS19445 | Not Available | Negative | 4391587 - 4393908 | 85021.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | EL161_RS19450 | Not Available | Negative | 4393892 - 4394752 | 31399.0 |
| lysr family transcriptional regulator | EL161_RS19455 | Not Available | Positive | 4394924 - 4395802 | 32062.0 |
| carbamoyltransferase hypf | EL161_RS19460 | Not Available | Negative | 4395807 - 4398314 | 91698.0 |
| hypothetical protein | EL161_RS19465 | Not Available | Negative | 4398386 - 4400236 | 67819.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

