Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wyl domain-containing protein | EL161_RS19215 | Not Available | Positive | 4335737 - 4336618 | 33362.9 |
| type i restriction-modification system subunit m | EL161_RS19220 | Not Available | Positive | 4336732 - 4339221 | 93976.3 |
| restriction endonuclease subunit s | EL161_RS19225 | Not Available | Positive | 4339221 - 4340591 | 51848.9 |
| duf4268 domain-containing protein | EL161_RS19230 | Not Available | Positive | 4340601 - 4341815 | 46294.6 |
| duf262 domain-containing protein | EL161_RS19235 | Not Available | Positive | 4341812 - 4343188 | 52597.7 |
| duf262 domain-containing protein | EL161_RS19240 | Not Available | Positive | 4343185 - 4345134 | 75074.7 |
| type i restriction endonuclease subunit r | EL161_RS19245 | Not Available | Positive | 4345124 - 4348159 | 115370.0 |
| hypothetical protein | EL161_RS22585 | Not Available | Positive | 4348178 - 4348600 | 15468.5 |
| duf6538 domain-containing protein | EL161_RS19255 | Not Available | Positive | 4348985 - 4350394 | 53802.1 |
| is3 family transposase | EL161_RS19260 | Not Available | Negative | 4350375 - 4351486 | 43311.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

