Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | EL161_RS19165 | Not Available | Negative | 4328638 - 4329204 | 21602.4 |
| duf2787 domain-containing protein | EL161_RS19170 | Not Available | Negative | 4329313 - 4329720 | 16032.8 |
| duf2787 domain-containing protein | EL161_RS19175 | Not Available | Negative | 4329910 - 4330323 | 15991.9 |
| type iv toxin-antitoxin system yeeu family antitoxin | EL161_RS19180 | Not Available | Negative | 4330567 - 4330923 | 13291.0 |
| hypothetical protein | EL161_RS19185 | Not Available | Negative | 4331055 - 4331417 | 13482.3 |
| radc family protein | EL161_RS19190 | Not Available | Negative | 4331455 - 4331961 | 18611.2 |
| is200/is605 family transposase | EL161_RS19195 | Not Available | Positive | 4332096 - 4332306 | 7385.04 |
| hypothetical protein | EL161_RS19200 | Not Available | Positive | 4332453 - 4333409 | 37579.8 |
| helix-turn-helix transcriptional regulator | EL161_RS19205 | Not Available | Positive | 4333436 - 4334467 | 39191.9 |
| hypothetical protein | EL161_RS19210 | Not Available | Positive | 4334500 - 4335240 | 27324.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

