Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | EL161_RS01745 | Not Available | Negative | 379885 - 380826 | 34057.0 |
| hlyd family secretion protein | EL161_RS01750 | Not Available | Negative | 380922 - 381935 | 36548.0 |
| tetr/acrr family transcriptional regulator | EL161_RS01755 | Not Available | Negative | 381932 - 382633 | 26010.7 |
| hypothetical protein | EL161_RS01760 | Not Available | Negative | 382856 - 383203 | 13172.8 |
| hypothetical protein | EL161_RS01765 | Not Available | Positive | 383702 - 384559 | 31232.7 |
| duf4785 domain-containing protein | EL161_RS01770 | Not Available | Positive | 384570 - 385898 | 46843.7 |
| winged helix-turn-helix domain-containing protein | EL161_RS01775 | Not Available | Positive | 386302 - 389568 | 121585.0 |
| dp-ep family protein | EL161_RS01780 | Not Available | Positive | 389589 - 389963 | 13420.7 |
| dp-ep family protein | EL161_RS01785 | Not Available | Positive | 390059 - 390802 | 26318.3 |
| diguanylate cyclase | EL161_RS01790 | Not Available | Positive | 391134 - 392153 | 37685.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

