Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dctp deaminase | EL161_RS18965 | Not Available | Positive | 4279778 - 4280359 | 21236.5 |
| aminodeoxychorismate lyase | EL161_RS18970 | Not Available | Positive | 4280365 - 4281174 | 29437.8 |
| endolytic transglycosylase mltg | EL161_RS18975 | Not Available | Positive | 4281171 - 4282181 | 37763.7 |
| dtmp kinase | EL161_RS18980 | Not Available | Positive | 4282178 - 4282807 | 22696.5 |
| dna polymerase iii subunit delta' | EL161_RS18985 | Not Available | Positive | 4282801 - 4283757 | 35151.7 |
| pilz domain-containing protein | EL161_RS18990 | Not Available | Positive | 4283764 - 4284090 | 11796.3 |
| tatd family hydrolase | EL161_RS18995 | Not Available | Positive | 4284289 - 4285077 | 29580.4 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | EL161_RS19000 | Not Available | Negative | 4285394 - 4286839 | 53484.9 |
| nucleoside recognition domain-containing protein | EL161_RS19005 | Not Available | Positive | 4286986 - 4288212 | 42968.6 |
| pqib family protein | EL161_RS19010 | Not Available | Negative | 4288391 - 4291027 | 94156.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

