Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpa | EL161_RS18915 | Not Available | Positive | 4269009 - 4271276 | 83650.1 |
| translation initiation factor if-1 | EL161_RS18920 | Not Available | Negative | 4271383 - 4271601 | 8273.24 |
| arginyltransferase | EL161_RS18925 | Not Available | Negative | 4271684 - 4272400 | 27798.5 |
| leucyl/phenylalanyl-trna--protein transferase | EL161_RS18930 | Not Available | Negative | 4272390 - 4273100 | 26919.4 |
| glycine zipper 2tm domain-containing protein | EL161_RS18935 | Not Available | Positive | 4273155 - 4273625 | 16654.2 |
| nif3-like dinuclear metal center hexameric protein | EL161_RS18940 | Not Available | Positive | 4273686 - 4274438 | 27370.7 |
| aec family transporter | EL161_RS18945 | Not Available | Negative | 4274533 - 4275489 | 33895.7 |
| methionine--trna ligase | EL161_RS18950 | Not Available | Negative | 4275792 - 4277822 | 76194.7 |
| iron-sulfur cluster carrier protein apbc | EL161_RS18955 | Not Available | Positive | 4277983 - 4279098 | 39144.5 |
| uridine kinase | EL161_RS18960 | Not Available | Positive | 4279110 - 4279748 | 24122.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

