Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | EL161_RS18870 | Not Available | Negative | 4259462 - 4260601 | 42496.6 |
| adenylosuccinate lyase | EL161_RS18875 | Not Available | Negative | 4260724 - 4262094 | 50756.7 |
| high frequency lysogenization protein hfld | EL161_RS18880 | Not Available | Negative | 4262124 - 4262741 | 22799.9 |
| trna 2-thiouridine(34) synthase mnma | EL161_RS18885 | Not Available | Negative | 4262745 - 4263863 | 41657.5 |
| nudix hydrolase | EL161_RS18890 | Not Available | Negative | 4264085 - 4264576 | 18722.2 |
| rrna large subunit pseudouridine synthase e | EL161_RS18895 | Not Available | Negative | 4264647 - 4265444 | 29653.6 |
| hypothetical protein | EL161_RS22365 | Not Available | Positive | 4265623 - 4265760 | 4992.97 |
| nadp-dependent isocitrate dehydrogenase | EL161_RS18900 | Not Available | Positive | 4265795 - 4268020 | 80476.2 |
| cold shock domain-containing protein cspd | EL161_RS18905 | Not Available | Negative | 4268258 - 4268464 | 7381.71 |
| atp-dependent clp protease adapter clps | EL161_RS18910 | Not Available | Positive | 4268658 - 4268966 | 11722.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

