Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | EL161_RS18720 | Not Available | Positive | 4219650 - 4220147 | 18952.9 |
| ferric iron uptake transcriptional regulator | EL161_RS18725 | Not Available | Negative | 4220239 - 4220670 | 16287.3 |
| sir2 family nad+-dependent deacetylase | EL161_RS18730 | Not Available | Positive | 4220927 - 4221667 | 27290.4 |
| atp-binding protein | EL161_RS18735 | Not Available | Positive | 4221685 - 4222134 | 17125.5 |
| hypothetical protein | EL161_RS18740 | Not Available | Positive | 4222372 - 4222734 | 13446.8 |
| magnesium/cobalt transporter cora | EL161_RS18745 | Not Available | Positive | 4222860 - 4223807 | 36650.8 |
| hd-gyp domain-containing protein | EL161_RS18750 | Not Available | Negative | 4223881 - 4225143 | 47509.0 |
| 2og-fe(ii) oxygenase | EL161_RS18755 | Not Available | Positive | 4225260 - 4225955 | 26224.0 |
| atp-binding protein | EL161_RS18760 | Not Available | Negative | 4225982 - 4227331 | 50919.6 |
| response regulator | EL161_RS18765 | Not Available | Negative | 4227322 - 4227996 | 25062.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

