Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate synthase | EL161_RS18670 | Not Available | Negative | 4207454 - 4208740 | 48053.8 |
| succinate dehydrogenase cytochrome b556 subunit | EL161_RS18675 | Not Available | Positive | 4209157 - 4209552 | 14473.9 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | EL161_RS18680 | Not Available | Positive | 4209546 - 4209893 | 12594.8 |
| succinate dehydrogenase flavoprotein subunit | EL161_RS18685 | Not Available | Positive | 4209894 - 4211660 | 64190.4 |
| succinate dehydrogenase iron-sulfur subunit | EL161_RS18690 | Not Available | Positive | 4211672 - 4212379 | 26613.3 |
| 2-oxoglutarate dehydrogenase e1 component | EL161_RS18695 | Not Available | Positive | 4212594 - 4215413 | 104842.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | EL161_RS18700 | Not Available | Positive | 4215462 - 4216658 | 43035.9 |
| adp-forming succinate--coa ligase subunit beta | EL161_RS18705 | Not Available | Positive | 4216778 - 4217944 | 41369.0 |
| succinate--coa ligase subunit alpha | EL161_RS18710 | Not Available | Positive | 4217944 - 4218816 | 29701.0 |
| nucleoside diphosphate kinase regulator | EL161_RS18715 | Not Available | Positive | 4219196 - 4219603 | 14641.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

