Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamc | EL161_RS18425 | Not Available | Positive | 4148799 - 4149896 | 41486.3 |
| efflux rnd transporter periplasmic adaptor subunit | EL161_RS18430 | Not Available | Positive | 4150269 - 4151351 | 39614.4 |
| efflux rnd transporter permease subunit | EL161_RS18435 | Not Available | Positive | 4151348 - 4154443 | 112731.0 |
| is200/is605 family transposase | EL161_RS18440 | Not Available | Negative | 4154512 - 4154763 | 9411.11 |
| hypothetical protein | EL161_RS18445 | Not Available | Negative | 4155005 - 4155232 | 8130.88 |
| sulfite exporter taue/safe family protein | EL161_RS18450 | Not Available | Negative | 4155334 - 4156089 | 26486.9 |
| cytoplasmic protein | EL161_RS18455 | Not Available | Negative | 4156315 - 4156629 | 11835.8 |
| dj-1/pfpi family protein | EL161_RS18460 | Not Available | Negative | 4156661 - 4157263 | 21521.9 |
| hypothetical protein | EL161_RS22355 | Not Available | Negative | 4157748 - 4157828 | 2781.15 |
| ig-like domain-containing protein | EL161_RS18465 | Not Available | Negative | 4157829 - 4159700 | 68682.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

