Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | EL161_RS18225 | Not Available | Negative | 4107265 - 4107540 | 10133.2 |
| pin domain-containing protein | EL161_RS18230 | Not Available | Negative | 4107648 - 4108193 | 20487.9 |
| hypothetical protein | EL161_RS18235 | Not Available | Negative | 4108268 - 4108510 | 9431.07 |
| abc transporter atp-binding protein | EL161_RS18240 | Not Available | Negative | 4108811 - 4109719 | 32600.4 |
| abc transporter permease subunit | EL161_RS18245 | Not Available | Negative | 4109716 - 4110546 | 30311.2 |
| yceh family protein | EL161_RS18250 | Not Available | Negative | 4110634 - 4111299 | 24755.5 |
| s1 rna-binding domain-containing protein | EL161_RS18255 | Not Available | Negative | 4111466 - 4112305 | 31285.8 |
| hypothetical protein | EL161_RS18260 | Not Available | Positive | 4112780 - 4112932 | 5707.95 |
| biosynthetic arginine decarboxylase | EL161_RS18265 | Not Available | Positive | 4113396 - 4115309 | 71009.4 |
| adenosylmethionine decarboxylase | EL161_RS18270 | Not Available | Positive | 4115592 - 4116563 | 36413.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

