Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella putrefaciens |
| Strain | strain NCTC12093 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mangrove soil; Sundarbans; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Phocoena phocoena |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313613 bp
Thymine Count
1315408 bp
Guanine Count
1215129 bp
Cytosine Count
1205246 bp
Genome Length
5049396 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EL161_RS18075 | Not Available | Positive | 4081079 - 4081474 | 14204.0 |
| hypothetical protein | EL161_RS18080 | Not Available | Positive | 4081736 - 4082122 | 14325.2 |
| duf2157 domain-containing protein | EL161_RS18085 | Not Available | Positive | 4082345 - 4083409 | 39546.5 |
| duf4401 domain-containing protein | EL161_RS18090 | Not Available | Positive | 4083402 - 4084526 | 41660.4 |
| gdyxxlxy domain-containing protein | EL161_RS18095 | Not Available | Positive | 4084526 - 4085041 | 19367.5 |
| exem/nuch family extracellular endonuclease | EL161_RS18100 | Not Available | Positive | 4085281 - 4088127 | 100838.0 |
| duf6678 family protein | EL161_RS18105 | Not Available | Positive | 4088335 - 4088763 | 16632.8 |
| cold adaptation protein atcc | EL161_RS18110 | Not Available | Negative | 4088821 - 4089717 | 33616.6 |
| cold adaptation protein atcb | EL161_RS18115 | Not Available | Negative | 4089728 - 4090486 | 29189.2 |
| cold adaptation protein atca | EL161_RS18120 | Not Available | Negative | 4090486 - 4091019 | 20276.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

